Dear All,
I converted the mdcrd ( coordinates, box sizes ) and mdvel ( velocities )
Amber trajectory files for every md record into the pdb format using ptraj in
Amber. Can I use these pdb files in Gromacs for performing analysis ? Or Will I
need to have some extra files to use analysis programs of Gromacs ? I will only
use g_msd , g_velacc , g_energy for calculating viscosity. I'm waiting for your
advices.
Sincerely
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