Dear Users,
I'm new to Gromacs. Before I try to generate a box of 100 molecules, I wanted
to ask it to the users.
Can I get a box of 100 molecules that are randomly distributed and not attached
to each other using the commands below?
If there are something wrong in commands please share your valuable suggestions
with me.
Thanks in advance
Adrien
pdb2gmx -f mol.pdb -o mol.gro -p mol.top -i mol.itp ( then chose suitable force
field )
genbox-ci mol.gro -nmol 100 -o 100mol.gro -p 100mol.top -box 12 12 12
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