li ming wrote:
Hi! All..
I wanna do the simulation on the translocation of protein in the lipid
bilayer, but how can I insert protein into lipid bilayer, and keep the
protein on the on the top of the center of lipid bilayer? Maybe I need
some detailed steps to achieve this goal, for I am a novice of gromacs
software...
Use editconf -center to define the appropriate center for each species within
the same box size. Then concatenate the files and clean up the extra headers
and box information.
-Justin
Any involved comment is appreciated. Thanks a lot!!!
Ming
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--
========================================
Justin A. Lemkul
Graduate Research Assistant
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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