It is probably best to fix your lipid bilayer problem first. Inserting a protein won't fix the problem(s).

XAvier

On Mar 31, 2009, at 8:05, nitu sharma <[email protected]> wrote:

Dear all,

I am trying to simulation of membrane proteins I have a basic question can we directly go for simulation of lipid +protein complex without doing simulation of individually simulation of lipid bilayer because I am facing lot of problem with topology file for lipid bilayer .

please any one suggest me whats the right thing I have to do.


thanks.

nitu sharma
School of life Sciences
Jawaherlal nehru university
New delhi,India
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