Pawan Kumar wrote:
Hello sir,

Thanks for your reply.
I have used this .mdp file. Is there anything wrong in the mdp file which I am using ?

No, but the manner in which you are using groups in that .mdp file isn't consistent with the way you've defined them in your index file - like I said last time:

    You can't have the same atom in multiple groups used for the same
    purpose within mdrun (e.g. T-coupling or energy). I guess you've
    constructed your index file in a manner that is inconsistent with
    your use of it.

The GROMACS error message could certainly be more helpful here - naming the groups and what you're using them for, but in your case this is not impeding your troubleshooting.

Mark
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