Pawan Kumar wrote:
Hello sir,
Thanks for your reply.
I have used this .mdp file. Is there anything wrong in the mdp file
which I am using ?
No, but the manner in which you are using groups in that .mdp file isn't
consistent with the way you've defined them in your index file - like I
said last time:
You can't have the same atom in multiple groups used for the same
purpose within mdrun (e.g. T-coupling or energy). I guess you've
constructed your index file in a manner that is inconsistent with
your use of it.
The GROMACS error message could certainly be more helpful here - naming
the groups and what you're using them for, but in your case this is not
impeding your troubleshooting.
Mark
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