I have segmentation fault error while running mdrun_mpi( gromacs 4.0.4). I have installed gromacs 4.0.4 two month ago and been working fine. Today, I just got Segment errors. Rebooting does not much help.
Here is log: [rd:06790] *** Process received signal *** [d:06790] Signal: Segmentation fault (11) [rd:06790] Signal code: (128) [rd:06790] Failing at address: (nil) [rd:06790] [ 0] /lib64/tls/libpthread.so.0 [0x36bc30c430] [rd:06790] [ 1] /lib64/ld-linux-x86-64.so.2 [0x36bb607496] [rd:06790] [ 2] /lib64/ld-linux-x86-64.so.2 [0x36bb60789e] [rd:06790] [ 3] /lib64/ld-linux-x86-64.so.2 [0x36bb60a68a] [rd:06790] [ 4] /lib64/ld-linux-x86-64.so.2 [0x36bb60a552] [rd:06790] [ 5] /usr/local/topspin/lib64/libvapi.so(vipul_cleanup+0x50) [0x2a984472b0] [rd:06790] [ 6] /usr/local/topspin/lib64/libvapi.so [0x2a98440c32] [rd:06790] *** End of error message *** Thanks _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
