Saskia Frenzel wrote:
Dear all,
I have a problem with the creating of a top-file because the following error
appeared:
Fatal error:
[ file spc.itp, line 32 ]
Atom index (1) in bonds out of bounds (1-0).
This probably means that you have inserted topologie
section "settles" in a part belonging to a different
molecule than you intended to. in that case move the
"settles" section to the right molecule.
I've now wikified the answer to this one here
http://wiki.gromacs.org/index.php/Errors#Atom_index_.281.29_in_bonds_out_of_bounds
Mark
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