nitu sharma wrote:
Dear all
I want remove water molecules from hydrophobic core of
lipid by using script Keepbyz.pl by (chris neale) . I want to know
basis of deciding uprez and lowrez variables . I mean to say how can I
decide which value of uprez and lowrez is suitable for my system protein
embedded in lipid bilayer.
The bounds of the hydrophobic core (i.e., the start of the acyl chains) are
probably a reasonable place to start.
-Justin
If anyone did these things please help me in solving this problem.
I will be really thankful for that.
Nitu Sharma
School of Life Sciences
Jawaherlal Nehru University
New delhi , India
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--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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