Jinyao Wang wrote: > hi,gmx-user > > I make a molecule *.itp and force field parameters. When I run editconf and > genbox to build a system,there are always a warning like this. "Warning: > masses will be determined based on residue and atom names, this can deviate > from the real mass of the atom type." > > I don't know how to solve the problem.
This is normal output. It is probably only relevant if doing more advanced tricks with editconf, like -princ. For normal preparation of a box, there should be no problem. -Justin > > Jinyao Wang [email protected] 2009-05-25 > > > ------------------------------------------------------------------------ > > _______________________________________________ gmx-users mailing list > [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to [email protected]. Can't post? Read > http://www.gromacs.org/mailing_lists/users.php -- ======================================== Justin A. Lemkul Ph.D. Candidate ICTAS Doctoral Scholar Department of Biochemistry Virginia Tech Blacksburg, VA jalemkul[at]vt.edu | (540) 231-9080 http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin ======================================== _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
