Dear gmx users,
On current, I plan to study a dendrimer (like PAMAM) using MD simulations
available in GROMACS. As is well-known, the .gro and .top files are the start
points for running MD simulations in GROMACS. However, the question how to
obtain the files for dendrimers puzzles me too much, since the dendrimers have
a complex dendritic structure. The mail-list and the manual seem not give
helpful clues on doing it. Are there someone that have the experiences to do
so? Could you share these experiences with us? Any suggesstion would be
acknowledged greatly.
Chaofu Wu, Dr.
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