Hi everyone, can one still search the mailing list entries? I can't find it in the new site! A question: what would one want to do if he had a PDB file of a dimer and pdb2gmx couldn't analyse both of them, ending up giving some errors. I tried to separate two mers and then pdb2gmx'ed them getting nice topologies of each. But how can I merge them together again? the numbering will be messy. There should be some more human way for that :-) Editconf does not take two files and I don't want to put the other one at a random position since it needs to be just beside the other mer! What should one do at all, if one gets a NMR- based PDB which has the structure of more than one chemically equal species and wants to work with it?
With Herzian thanks... Cheers, Peyman -- Peyman Yamin Institut fuer Strukturbiologie und Biophysik (ISB) ISB-3: Strukturbiochemie Forschungszentrum Juelich D-52425 Juelich Tel: (49)-2461-61-2875 Fax: (49)-2461-61-2023 mailto: p.yamin[at]fz-juelich.de ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzende des Aufsichtsrats: MinDir'in Baerbel Brumme-Bothe Geschaeftsfuehrung: Prof. Dr. Achim Bachem (Vorsitzender), Dr. Ulrich Krafft (stellv. Vorsitzender), Prof. Dr. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ _______________________________________________ gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
