nikhil damle wrote:
Hello,
Thanks for the reply. I am trying to add N-H hydrogen of a residue which is tab 
separated formate; just like other residues. if i remove this H from .hdb file, 
file can be read and pdb2gmx gives missing atom error. But when i have it in 
the file, it can not read it. if there were version related problem, it should 
give same error even after removing this H. i m using Gromacs-4.0.5 on linux 
machine. so no OS related problems possible

OK, so you've broken the format. Read about it in chapter 5 of the manual.

Mark
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