shahab shariati wrote:
Hi
What is the best force field for protein-dna interactions.
Time for a literature search :-) The answer to your question is probably
"it depends".
I have 2 separate
pdb file for protein and dna. Can I merge theses 2 pdb files as input file
for gromacs.
Yes. You can translate and rotate them with editconf, then paste them
together in a text editor, preserving the PDB format correctly.
Mark
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