Hi ALL, I have a CG protein in a CG lipid bilayer. I have packed the lipids around the protein using InflateGRO, following Justin's tutorial. Now I want to solvate it with CG waters. In all-atom we need to set a higher value for VanderWaal's radii for C in vdwradii.dat file. What should it be like for solvating my CG system, since there are no "C" here? Is there any different file for that? I tried using genbox normally and fornd CG waters inserted between the CG protein beads. How to solve this? Any suggestion is welcome.
Regards, Anirban
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