leila karami wrote:
dear justin
I use amber force field in gromacs.can this subject make such error :
Atom index (1) in settles out of bounds (1-0).
This probably means that you have inserted topology section "settles" in
a part belonging to a different molecule than you intended to.
In that case move the "settles" section to the right molecule.
Did you read the solution I posted before? You have #included your water .itp
file in the wrong place.
-Justin
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--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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