Itamar Kass wrote:
Hi,

I think it is more important how you compiled you gromacs. Had you used --enable-mpi?

Indeed, that is also very important.

Itamar

On Sun, Nov 8, 2009 at 2:08 AM, milad ekramnia <[email protected] <mailto:[email protected]>> wrote:

    Hi Mark
    my mdrun command line  is :
    mpirun -n 4 mdrun_mpi -v -s topol.tpr

That's great, but I no longer remember the context of your question. Please reply to the previous email and leave the content.

If you are using GROMACS 3.x then you may need to give a -np flag to grompp and mdrun_mpi also.

Mark
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