hema dhevi wrote:

hai justin,


    ya its robust. and urs is the only tutorial which i found for
    transmembrane protein MD simulation in GROMACS. Its really useful.
    thank you.

    As you said i tried it in other system also there i used gromacs
    version 3.3.3. i am getting the same kind of error.
    I didnt use any special configuration flags for installation, for
    both the versions and in both the
    systems.

    And the compiler which i am using is gcc version 4.1.2 20070626 (Red
    Hat 4.1.2-14)


The gcc-4.1.x series are broken, and have long been known to be the cause of several problems reported to this list. Please upgrade your compiler to a more modern one (I believe all newer versions of gcc work fine, per my own usage), and re-install Gromacs.

-Justin

    Thanks in advance

    with regards
    N.Hema Dhevi


--
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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