Henry Yang wrote:
Hello gromacs experts,
I want to calculate the PN vector angular distribution along the bilayer
axis. I am currently using gromacs 4.0.5 version. Is there any tools in
gromacs which one I can use to calculate this properties? If not, anyone
pls tell me how can I proceed? I am actually quiet new. So I think I
need some basic knowledge..
Thanks in advance
/Henry
Biochemistry
Check out the list of tools on the website. You could consider g_order
or others. Be sure to make separate groups for both sides of the bilayer.
--
David van der Spoel, Ph.D., Professor of Biology
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone: +46184714205. Fax: +4618511755.
[email protected] [email protected] http://folding.bmc.uu.se
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