afsaneh maleki wrote:
Hi,

I want to obtain electron density for solvent in z direction for bilayer.

I used following options:

] g_density -f md.xtc -s md.tpr -d z -dens electron -o electrondens.xvg -ei electrons.dat -symm -n index.ndx

Atomtapes in md.gro are OH,HW1,HW2

And “electrons.dat”  file contains:

3

  OW= 8

 HW1=1

 HW2=1

But I get error:

Fatal error:

Invalid line in datafile at line 1

What is my error?

remove = sign


Best wishes,

 Afsaneh Maleki



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David van der Spoel, Ph.D., Professor of Biology
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