Arden Perkins wrote:
Also, you can type " -h " in your terminal and it will bring up a list of commands and options for the program and can usually explain what they mean/do. For example: -h pdb2gmx

Such a command is incorrect. The -h flag must follow the Gromacs tool, otherwise you will undoubtedly receive "-h: command not found."

-Justin

Arden Perkins
On Tue, Jan 12, 2010 at 4:17 AM, leila karami <[email protected] <mailto:[email protected]>> wrote:

    Hi
How is determined distance from solute atom to the edge of the box
    in editconf command (what criterion)?
    Any help will highly appreciated!


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========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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