Justin A. Lemkul skrev:
leila karami wrote:
Dear all
I want to do Hydrogen bond analysis for my MD data (protein-dna
interaction).
If anybody know the tutorial regarding that, please let me know.
Any help will highly appreciated!
Start with the manual and g_hbond -h, and come back with a more
focused question. There isn't going to be detailed tutorials for
every single task you can imagine, but certainly with the references
provided you should be able to make a reasonable attempt at whatever
analysis you're trying to do. If it doesn't work, then post what
you're doing and what you want to be doing to get some advice.
-Justin
And there are heaps of threads in the list archives that cover many of
the problems you may run into.
Erik
--
-----------------------------------------------
Erik Marklund, PhD student
Laboratory of Molecular Biophysics,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: +46 18 471 4537 fax: +46 18 511 755
[email protected] http://xray.bmc.uu.se/molbiophys
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