On 23/02/2010 1:03 PM, Paymon Pirzadeh wrote:
Hello,
I have a run with the xtc, trr and edr files available. I would like to
color a snapshot of my system with respect to rmsd or potential energy
of my particles. How can I extract the potential energy, rmsd or any
other needed data from the files available? Is there a specific GROMACS
command that I can use?
Many. See manual section 7.4 for a brief description of them. To get
more info about a specific command use "man g_energy" or "g_energy -h".
Mark
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