Dear all, is it possible to simulate more than one protein with GROMACS? I would like to simulate two lysozyme proteins not solvated and I tried changing number of proteins in topology file (attached) and then I used this modified .top file to generate a .gro configuration with genbox, but I always end up getting just one protein in the simulation box...
thanks, Cristiano –––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––– Cristiano De Michele, Ph.D. Department of Physics Tel. : +390649913524 University of Rome "La Sapienza" Fax : +39064463158 Piazzale Aldo Moro, 2 I-00185 Roma - Italy homepage: http://pacci.phys.uniroma1.it/ ------ "Shoot for the moon. Even if you miss, you'll land among the stars." -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
