afsaneh maleki wrote:

Hi,
I inserted the protein in bilayer at Z normal and simulated membrane protein. to calculate free energy, it is better to use "umbrella sampling tutorial " from Justin Lemkul or "free energy tutorial" from David Mobley for my system?

That depends entirely upon the process you want to study. What free energy do you want?

-Justin

thanks,
Afsaneh


--
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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