Hi everyone,
how to solve the memory problems, I tried both double and single
precisions. The problems show like this,
1)
-------------------------------------------------------
Program mdrun, VERSION 4.0.7
Source code file: ../../../../src/gmxlib/smalloc.c, line: 147
Fatal error:
Not enough memory. Failed to calloc 2643747108 elements of size 4 for
full_matrix
(called from file ../../../../src/mdlib/minimize.c, line 2219)
-------------------------------------------------------
: Cannot allocate memory
2)
Program mdrun, VERSION 4.0.7
Source code file: smalloc.c, line: 147
Fatal error:
Not enough memory. Failed to calloc 2643747108 elements of size 8 for
full_matrix
(called from file minimize.c, line 2219)
-------------------------------------------------------
"You Try to Run the Universe" (Tricky)
: Cannot allocate memory
Halting program mdrun
gcq#44: "You Try to Run the Universe" (Tricky)
[0] MPI Abort by user Aborting program !
[0] Aborting program!
p0_21388: p4_error: : -1
p4_error: latest msg from perror: No such file or directory
Thanks and regards,
lina
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