Hi all I am using gromacs-3.3.99's g_sas_s in a long trajectory and I get this error right away. I assume its memory capacity, is there a way (other than cutting the trj in smaller chunks?)
Select a group: Select a group: *** glibc detected *** /usr/local/gromacs-3.3.99_20071008/bin/g_sas_s: malloc(): memory corruption: 0x000000000a809680 *** ======= Backtrace: ========= /lib64/libc.so.6[0x38b8c71d21] /lib64/libc.so.6(__libc_calloc+0xc3)[0x38b8c72bb3] /usr/local/gromacs-3.3.99_20071008/bin/g_sas_s[0x4257d5] /usr/local/gromacs-3.3.99_20071008/bin/g_sas_s[0x40419a] /usr/local/gromacs-3.3.99_20071008/bin/g_sas_s[0x405b1a] /usr/local/gromacs-3.3.99_20071008/bin/g_sas_s[0x402de3] /lib64/libc.so.6(__libc_start_main+0xf4)[0x38b8c1d8b4] /usr/local/gromacs-3.3.99_20071008/bin/g_sas_s[0x402d19] ======= Memory map: ======== 00400000-00599000 r-xp 00000000 08:05 813706 /usr/local/gromacs-3.3.99_20071008/bin/g_sas_s 00799000-007a2000 rwxp 00199000 08:05 813706 /usr/local/gromacs-3.3.99_20071008/bin/g_sas_s 007a2000-007ad000 rwxp 007a2000 00:00 0 0a7dd000-0a840000 rwxp 0a7dd000 00:00 0 thanks in advance -- Camilo Andrés Jiménez Cruz
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