Dear Justin, Hello again Thanks for the message. I want to increase the distance between solutes in simulation box before MD simulation. How can I do it?
Rasoul On Sat, Apr 17, 2010 at 5:16 PM, Justin A. Lemkul <[email protected]> wrote: > > > rasoul nasiri wrote: > >> Dear All, >> Hello >> >> I understand one can adjust distance of between solvent molecules by >> genbox command and -vdwd but I don't know, how do it between the solutes? >> >> > Position your solutes using editconf -center, then add solvent. > > -Justin > > Thanks for helping! >> >> Rasoul >> >> > -- > ======================================== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > MILES-IGERT Trainee > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to [email protected]. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php >
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