Dear All
Using g_sas on trajectory file with command
g_sas -f .xtc -s .tpr -oa atomarea.xvg
gives following output
@ title "Area per atom" @ xaxis label "Atom #" @ yaxis label
"Area (nm\S2\N)" @TYPE xy 1 0.139885 0.0351154 2 0.0510893 0.0236223 3
0.0510077 0.0234374 4 0.0512037 0.0234554 5 0.0284763 0.0401088 6
0.236609 0.108979
Tghe first column is atom no. and what are the values in two columns. I want
average solvent accessible surface area of each atom of my protein in whole
trajectory.
Shahid Nayeem
--
gmx-users mailing list gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
