Hi, Is there an option in any gromacs utility to apply periodicity to the output configuration or trajectory? I want to get all the coordinates just within an elementary box, between 0 and LBOX in spite of any details of the system.
For example, "editconf -no(pbc)" does not do its work since after processing negative coordinates are sometimes present as well as those bigger than LBOX. Vitaly Dr. Vitaly Chaban -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
