Dear Mark, It works.
Thanks, lina ________________________________ From: gmx-users-boun...@gromacs.org [gmx-users-boun...@gromacs.org] on behalf of Mark Abraham [mark.abra...@anu.edu.au] Sent: Thursday, August 26, 2010 1:48 PM To: Discussion list for GROMACS users Subject: Re: [gmx-users] How to calculate the distances ----- Original Message ----- From: #ZHAO LINA# <zhao0...@e.ntu.edu.sg> Date: Thursday, August 26, 2010 15:17 Subject: [gmx-users] How to calculate the distances To: "gmx-users@gromacs.org" <gmx-users@gromacs.org> > Hi all, > > I guess the question I'm going to ask probably is a bit simple to those who > know, well. After MD, I got a dimer, how could I get the distance of those > two proteins, the centre of mass distance. In this simulation, there were six > involved, but I only want to calculate the two of them. Probably g_dist. See section 7.4 of the manual for some clues, and then the man pages of the individual tools for more information. Mark
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