Dear gromacs users , thank you for your reply when i run the ./grompp it shows the error as follows ./grompp_d -f em.mdp -c spep_b4em.gro -p spep.top -o spep_em.tpr
ignoring obsolete mdp entry 'cpp' Back Off! I just backed up mdout.mdp to ./#mdout.mdp.4# checking input for internal consistency... processing topology... Opening library file /usr/local/gromacs/share/gromacs/top/ffG53a6.itp Opening library file /usr/local/gromacs/share/gromacs/top/ffG53a6nb.itp Opening library file /usr/local/gromacs/share/gromacs/top/ffG53a6bon.itp Opening library file /usr/local/gromacs/share/gromacs/top/ff_dum.itp Generated 222 of the 1653 non-bonded parameter combinations ------------------------------------------------------- Program grompp_d, VERSION 4.0.7 Source code file: toppush.c, line: 1379 Fatal error: Incorrect number of parameters - found 2, expected 0 or 0 for Connect Bonds what could i do to avod error? i am expecting your valuable reply
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