Thanks Justin, this explains everything. I've got #include "my.ff/forcefield.itp" line in my top file.
> My guess is that this is a matter of how the force field was #included in > the > .top file. For instance: > > #include "my.ff/forcefield.itp" > > will match $GMXLIB first, but > > #include "./my.ff/forcefield.itp" > > will match the working directory first. Is this perhaps the issue you're > finding? Other simple #include statements (like #include "ions.itp", etc) > still > use the old order of preference, but subdirectories make that a bit more > difficult. > > -- Zdraví skoro zdravý Karel "Krápník" Berka **************************************************************** RNDr. Karel Berka, Ph.D. Palacký University in Olomouc Faculty of Science Department of Physical Chemistry tř. 17. listopadu 1192/12 771 46 Olomouc tel: +420-585634769 fax: +420-585634769 e-mail: [email protected] ****************************************************************
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