----- Original Message ----- From: Fabio Affinito <[email protected]> Date: Wednesday, November 17, 2010 1:58 Subject: [gmx-users] problem linking fftw2 with gromacs 4.5.3 To: [email protected]
> Hi folks, > I'm experiencing some problem when I try to compile gromacs 4.5.3 > linking fftw. > This is the configure: > > ./configure --prefix=/bgp/userinternal/cin0644a/gromacs.453 \ > > --host=ppc --build=ppc64 --enable-ppc-sqrt=1 \ > > --disable-ppc-altivec \ > > --enable-bluegene --enable-mpi --with-fft=fftw2 \ > > --program-suffix=_mpi_bg_dp \ > > --without-x \ > > CC=mpixlc_r \ > > CFLAGS="-O3 -qarch=450d -qtune=450" \ > > MPICC=mpixlc_r CXX=mpixlC_r \ > > CXXFLAGS="-O3 -qarch=450d -qtune=450" \ > > CPPFLAGS="-I/bgp/userinternal/cin0644a/fftw2/include" \ > > F77=mpixlf77_r FFLAGS="-O3 -qarch=auto -qtune=auto" \ > > LDFLAGS="-L/bgp/userinternal/cin0644a/fftw2/lib" > > This is the error during the make > > mkdir .libs > > libtool: link: cannot find the library `../mdlib/libmd_mpi.la' > or unhandled argument `../mdlib/libmd_mpi.la' > > make[1]: *** [libgmxpreprocess_mpi.la] Error 1 > > make[1]: Leaving directory `/bgp/userinternal/cin0644a/gromacs- > 4.5.3/src/kernel' > The directory /lib: > > > libfftw.a libfftw_threads.a > librfftw.a librfftw_threads.a > > libfftw.la libfftw_threads.la librfftw.la > librfftw_threads.la > The directory /include: > > > fftw.h fftw_threads.h rfftw.h rfftw_threads.h > > Do you have any hint? I'd be looking for errors higher up in the output, where mdlib/libmd_mpi.la got (not) made. Mark > > Thanks in advance, > > Fabio > > > > -- > ********************************************* > Fabio Affinito, PhD > CINECA > SuperComputing Applications and Innovation Department - SCAI > Via Magnanelli, 6/3 > 40033 Casalecchio di Reno (Bologna) ITALY > +39/051/6171794 (Phone) > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [email protected]. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
-- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
