Dear Gromacs User
My pdb is homodimer with Arg as c-terminal residue. With this pdb I am
etting following error in pdb2gmx command
Program pdb2gmx, VERSION 4.0.7
Source code file: pdb2gmx.c, line: 429
Fatal error:
Atom OXT in residue ARG 107 not found in rtp entry with 17 atoms
while sorting atoms
The command executed is as follows
pdb2gmx -f .pdb -o .gro -p .top
I tried to change the OXT atom name in pdb file to O2, then also I am
getting the same error.
In .rtp entry there is ARG residue as N-ter but for C-ter ARG there is no
residue.
Please suggest.
Waiting for helps from gromacs users.
Shahid Nayem
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