Thanks a lot for your reply.. On Mon, Jan 3, 2011 at 6:07 PM, Mark Abraham <[email protected]>wrote:
> On 2/01/2011 2:18 PM, sreelakshmi ramesh wrote: > >> Dear all, >> I have a protein in water and i have simulated it for few >> nanoseconds and i now i wanted to monitor the The sum of the O-H distances >> (in Å) of the backbone >> hydrogen bonds ROH:i dono how to extract the value from the trajectory >> file.Any siuggestion please.Thanks in advance >> > > Look in section 7.4 of the manual for a suitable tool for extracting the > raw distances. You'll need some other non-GROMACS tool to add them up. > > Mark > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to [email protected]. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
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