Rebeca García Fandiño wrote:
Hello,
I have several files containing two columns, x and y (x is the same for all of them). I would like to calculate the average and standar deviation (as the error bar) for the y column for all my data sets.
I have tried using g_analyze:

g_analyze -n 3 -av average.xvg -errbar stddev -f set1.xvg & set2.xvg & set3.xvg

I get several errors:
set2.xvg: Command not found
set3.xvg: Command not found

And also: "Set 2 is horter (0) than the previous set (1775)

I have seen a similar error in the gromacs list archive, and the problem seemed to be the space before the &. I remove this whitespace and also the space after the &, but I get the same results.

How could I solve this problem?


g_analyze does not take multiple simultaneous input. The "&" referred to in the help text refers to data sets within the same .xvg file that are separated by &.

-Justin

Thanks a lot for your help in advance.

Best wishes,

Rebeca Garcia
Postdoctoral student
Santiago de Compostela University
Spain
[email protected]


                

        
        
        

        

        
        
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--
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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