Hello Everyone I am setting up a system for protein ligand complex using amber force filed with Gromacs 4.5. in pdb2gmx command i used -water tip3p but when executing genbox command with -cs ffamber_tip3p.gro....I am getting follwing error "*Fatal error: Library file in current dir nor not found ffamber_tip3p.groin default directories. (You can set the directories to search with the GMXLIB path variable)*
Also I manually edited the complex.top file tip3p.itp -> ffamber_tip3p.itp...still the problem persists I searched the /gromacs-4.5/share/gromacs/top directory, and did not find any such file there... Can anyone please guide me where I can get ffamber_tip3p.gro file or solve my problem? -- -- SUNITA GUPTA
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