On Mon, Mar 7, 2011 at 10:45 PM, Justin A. Lemkul <jalem...@vt.edu> wrote:
> > I'm guessing you have different chain identifiers, i.e. identical >> chains, just labeled A and B or something? >> >> >> I got four chains. and the .pdb from trjconv do not distinguish those >> things and don't show chain info. >> >> Do you have some nice way to view .gro in pymol. (compare VMD I am a bit >> familiar with pymol) >> >> > Renumber using genconf. You should be able to select consecutive residues > in this way. Otherwise, use a couple quick text editor tricks to write in > chain identifiers to make selection easy. > genconf works so perfect here. Thanks again! lina > > -Justin > > Thanks again, >> >> lina >> >> > > -- > ======================================== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > MILES-IGERT Trainee > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin > > ======================================== > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
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