Hi,

How to write your hdb block is described in chapter 5.6.4 of gromacs-4.5.3 manual

On Mon, 14 Mar 2011 11:58:17 +0200, Yulian Gavrilov wrote:
Dear gromacs users,
Please, can you explain the structure of FFAMBER99.HDB file

For example,
LYN    7
1    1    H    N    -C    CA   
1    5    HA    CA    N    CB    C   
 2    6    HB    CB    CA    CG   
2    6    HG    CG    CB    CD   
2    6    HD    CD    CG    CE   
2    6    HE    CE    CD    NZ   
2    3    HZ    NZ    CE    CD

 Sincerely,

Yulian Gavrilov

--
Best Regards,
Alexey 'Alexxy' Shvetsov
Petersburg Nuclear Physics Institute, Russia
Department of Molecular and Radiation Biophysics
Gentoo Team Ru
Gentoo Linux Dev
mailto:[email protected]
mailto:[email protected]
mailto:[email protected]
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