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Miguel Quiliano Meza wrote:
Dear community.
Thank you for your help. After doing "./configure" without problems, the
system showed ERROR again after "make".Here, I put the steps that I
followed, what is my error?. Please help me with your advices. By the
way... I made a mistake, I am using Rocks cluster 5.4.
root@bioinfocluster gromacs-4.5.4]# mpi-selector-menu
Current system default: openmpi-1.4-gcc-x86_64
Current user default: <none>
"u" and "s" modifiers can be added to numeric and "U"
commands to specify "user" or "system-wide".
1. openmpi-1.4-gcc-i386
2. openmpi-1.4-gcc-x86_64
3. rocks-openmpi-1.4.1
4. sun-ct-8.2.1-i386
5. sun-ct-8.2.1-x86_64
U. Unset default
Q. Quit
Selection (1-5[us], U[us], Q):
1. export CPPFLAGS="-I/opt/rocks/include"
2. export LDFLAGS="-L/opt/rocks/lib"
3.
4. ./configure --enable-mpi --prefix=/share/apps/opt/gromacs
*
*
*Until this point, I did not have errors, then...*
# make
....
The actual error message is somewhere in your ellipsis. Look at your output
again and post the real error information. Also, please copy and paste your
commands directly from your terminal, rather than from whatever protocol you're
following. I sincerely doubt you typed "1. export CPPFLAGS..." as your command.
-Justin
make[3]: *** [libmd.la <http://libmd.la/>] Error 1
make[3]: Leaving directory `/share/apps/src/gromacs-4.5.4/src/mdlib'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/share/apps/src/gromacs-4.5.4/src'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/share/apps/src/gromacs-4.5.4/src'
make: *** [all-recursive] Error 1
*Thanks in advance.
Miguel.*
--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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