On 13/04/2011 3:38 AM, Miguel Quiliano Meza wrote:
Hi everyone.
I followed the steps in
http://www.gromacs.org/Downloads/Installation_Instructions#Prerequisites
for my problem, but I obtained problems at the moment to perform "make".
So, as mention the web page of gromacs...
If you get errors during GROMACS compilation (the "make" step) that
suggest that you "recompile with -fPIC," then you should return to
this FFTW stage and configure with |--enable-shared|or |--with-pic|.
By the way, previously I performed "make" with FFTW version 3.2.2
(default version in rocks cluster 5.4)
I did:
root@bioinfocluster fftw-3.2.2]# ./configure --enable-threads
--prefix=/share/apps/opt/fftw
Without errors, and then:
[root@bioinfocluster fftw-3.2.2]# make
make[3]: Leaving directory `/share/apps/src/fftw-3.2.2/tools'
make[2]: Leaving directory `/share/apps/src/fftw-3.2.2/tools'
Making all in m4
make[2]: Entering directory `/share/apps/src/fftw-3.2.2/m4'
make[2]: Nothing to be done for `all'.
make[2]: Leaving directory `/share/apps/src/fftw-3.2.2/m4'
make[1]: Leaving directory `/share/apps/src/fftw-3.2.2'
What could be the problem? please advices.
The problem is probably that you haven't configured FFTW with
--enable-shared. Go back to that step, run "make distclean" and try to
configure again.
Mark
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