Dear Justin and Mohsen Very thanks for your attention
Justin you said PMF is much easier in my case (protein-dna complex). Is there tutorial or example about using PMF method in gromacs to obtain free binding energy? If so, please address me. Best regards -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
