Please post all Gromacs-related questions to the gmx-users list. I am not a
private help service. I am CC'ing the message to the list and would ask that
all further discussion be posted there.
The plot you showed was simply hydrogen bonds between some molecule and FAD,
which can easily be produced with g_hbond. Have a thorough look through the
Gromacs manual, Appendix D, for the capabilities of Gromacs programs.
-Justin
Babajaan nawaz wrote:
**
*
*
*Dear *Justin i had successfully followed your manual and i applied the
protocols in our work, i need one more fovour from you, i need this type
of graph (ligand interaction with specfic residues), for this which
command i had to use.
Untitled-3 copy.jpg
Thaking you
B. Babajan
--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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