Dear justin,
                 Thank you for your previous reply.
Can i use g_morph  tool in gromacs for wild type and mutated Pdb
Because it ask two input PDB files 
should these two files contains equal no residues? otherwise can i use 
different PDB (WT and Mutated PDB )  which differ only by two or more residue 
due to mutation

Thanks in advance
-- 
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