Dear justin, Thank you for your previous reply what is explicit and implicit solvent model ? In gromacs Normally which one is implemented and used bydefault I want to use explicit solvent model in order to account electrostatic effect of ions on H-bonding I mean here i am studying the effect of ionic strength on h-bonding of my protein for that Which tool of gromacs can i use to get proper result I am expecting your reply Thanks In advance
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