Dear users, I have done some 16 simulations of a protein with mutations, by keeping the distance between protein atom and the simulation box to be 1.0nm (i.e, -d option in editconf) but only in one of the simulation I found violation of minimum image distance. So Should I increase the box size only for this or should I increase for all and redo the simulations?
Thank you With Regards M. Kavyashree
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
