On 17/09/2011 11:28 PM, ahmet yıldırım wrote:
Dear Tsjerk and Justin,

Thanks for your reply. I will contact the PRODRG developers.
can you suggest anyway/anytool for generating ligand coordinates/topologies?

http://www.gromacs.org/Documentation/How-tos/Steps_to_Perform_a_Simulation

Mark
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