When GROMACS takes care of the optimization this doesn't happen.

Jose R Tusell


On Tue, Nov 22, 2011 at 12:35 AM, Gerrit Groenhof <[email protected]> wrote:
>  On 11/22/2011 04:02 AM, [email protected] wrote:
>>
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>  2. Re: GROMACS/ORCA QMMM (Jose Tusell)
>
> Does anyone know what is going on with the coordinates of the QM
> region?  Why are they not converted to the correct units?  Could
> anyone point me to the error?
>
> I have not experienced this myself. The only thing I can think of is that
> ORCA returns the atom coordinates in nm?
> Does this happen also when you let Gromacs take care of the optimization?
>
> Gerrit
>
>
>
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