Hi,
This has been compiled and installed in same machine which runs Linux. It
never happens in any other version lower than gromacs4.5.
Sanku
________________________________
From: "Broadbent, Richard" <richard.broadben...@imperial.ac.uk>
To: Sanku M <msank...@yahoo.com>; Discussion list for GROMACS users
<gmx-users@gromacs.org>
Sent: Saturday, December 3, 2011 7:24 PM
Subject: Re: [gmx-users] output logfile
Re: [gmx-users] output logfile
Hi Sanku
The ^M ‘s in that sample indicate a line break that was issued by a different
text formatting standard. This frequently happens if files are generated in one
OS say Windows then viewed in another say unix. Is your version of gromacs
compiled for your system
or was is compiled for a different machine/OS?
Richard
On 03/12/2011 19:50, "Sanku M" <msank...@yahoo.com> wrote:
Hi,
> It might be a very minor issue but I find in versions of gromacs 4.5.4, the
>output log file ( in verbose mode) writes the progress of the simulation in a
>single line ( unlike in previous gromacs 4.0.7 version) where it used to write
>the progress in a new lines.
As a result, in gromacs4.5.4, opening a logfile or issuing unix 'tail' command
to see last few lines becomes a bit time-consuming as the progress is written
in a single line.
>
>An example is shown below for gromacs 4.5.4:
> ^Mstep 2100, will finish Sat Dec 3 19:55:12 2011vol 0.79 imb F 0% ^Mstep
>2200, will finish Sat Dec 3 19:54:59 2011vol 0.80 imb F 1% ^Mstep 2300,
>will finish Sat Dec 3 19:54:49 2011vol 0.79 imb F 1% ^Mstep 2400, will
>finish Sat Dec 3 19:54:40 2011vol
0.80 imb F 0% ^Mstep 2500, will finish Sat Dec 3 19:54:31 2011vol 0.80 imb
F 1% ^Mstep 2600, will finish Sat Dec 3 19:54:22 2011vol 0.80 imb F 1%
^Mstep 2700, will finish Sat Dec 3
>
>I wonder whether there is an fix for this minor issue.
>
>Thanks
>Sanku
>
>
>>________________________________
>
>
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