Dear Users, Am running a shell script for the command g_mindist=
#!/bin/bash groups=`grep "^\[ " -o index.ndx | wc -l` for ((i=0; i<$groups; i++)) do echo $((i++)) 3393 | g_mindist -f md.xtc -s md.tpr -od $i.xvg -o atm-pair$i.out -d 0.8 -e 5000 -n index.ndx done here the index file has 3393 groups, the script reads each group against the final group ie 3393 (1-3393,2-3393,3-3393etc), the .xvg file has been created successfully but the .out file is empty. Please tell me why its so. Thanks, Aiswarya
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